BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D07LP1|AL425853
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1364 1573 0.0
>3x_Contig1364
Length = 7464
Score = 1573 bits (793), Expect = 0.0
Identities = 794/795 (99%)
Strand = Plus / Plus
Query: 1 gctgctttggatctaatcaagaatatgggtgaaccagttgacgtatttgttacgggatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5679 gctgctttggatctaatcaagaatatgggtgaaccagttgacgtatttgttacgggatcg 5738
Query: 61 ttgcatttagtaggtggattcttggtagtactagacggaaagccaacctaaaccaaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5739 ttgcatttagtaggtggattcttggtagtactagacggaaagccaacctaaaccaaacta 5798
Query: 121 ttcgtttttaaccaccaagtgataagaacctcgaacaaatttattatttcttttatgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5799 ttcgtttttaaccaccaagtgataagaacctcgaacaaatttattatttcttttatgtgt 5858
Query: 181 ttatgtatatatgtacaaaatgctatttagttatagaatattaaactttatctacacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5859 ttatgtatatatgtacaaaatgctatttagttatagaatattaaactttatctacacttc 5918
Query: 241 aatgcatggtttatctacaatgtctttaccataccagatggaccagtctttaaaatactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5919 aatgcatggtttatctacaatgtctttaccataccagatggaccagtctttaaaatactt 5978
Query: 301 gccatttatgtaggaattggaagtctcataactcctcattgcctctattgcacttctgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5979 gccatttatgtaggaattggaagtctcataactcctcattgcctctattgcacttctgat 6038
Query: 361 atcatggaaactgatctgcaaacatattttccgagaaatcaacggtgatacctcgagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6039 atcatggaaactgatctgcaaacatattttccgagaaatcaacggtgatacctcgagaac 6098
Query: 421 ctgtccgaattgattaaaatcatcgattatttgttggatatccaaatcataaatgtgaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6099 ctgtccgaattgattaaaatcatcgattatttgttggatatccaaatcataaatgtgaga 6158
Query: 481 ctttgaattcaactctgtagaaatcgacttatgtttccttgaatatttcttcataattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6159 ctttgaattcaactctgtagaaatcgacttatgtttccttgaatatttcttcataattaa 6218
Query: 541 gcagcgacgtgctccagtcgagtcaaagttttgaatatctttacaaaaatctggatgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6219 gcagcgacgtgctccagtcgagtcaaagttttgaatatctttacaaaaatctggatgaac 6278
Query: 601 atactgttgaatatctaamagactcttttcagaggagtctagagaatctattacacccca 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6279 atactgttgaatatctaaaagactcttttcagaggagtctagagaatctattacacccca 6338
Query: 661 atgtggaactaaatgtacaccgttcactttgaataggtggaatctggcgtatttcataaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6339 atgtggaactaaatgtacaccgttcactttgaataggtggaatctggcgtatttcataaa 6398
Query: 721 ctgagcagcatcatcagggaacaagaaatgcaattcaacataaacgacatctcgggaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6399 ctgagcagcatcatcagggaacaagaaatgcaattcaacataaacgacatctcgggaacc 6458
Query: 781 tgtcttattgtcata 795
|||||||||||||||
Sbjct: 6459 tgtcttattgtcata 6473
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6581
Number of Sequences: 1807
Number of extensions: 6581
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)